Dana-Farber Cancer Institute (DFCI)  | Dept of Cancer Biology (DFCI)  | Harvard Medical School (HMS)  | Dept of Genetics (HMS)     

2005 Publications

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Davison EM, Harrison MM, Walhout AJ, Vidal M, Horvtiz HR.
lin-8, which antagonizes Caenorhabditis elegans RAS-mediated vulval induction, encodes a novel nuclear protein that interacts with the LIN-35 Rb protein.

Genetics 2005; 171:1017-37.

 

Gillette WK, Esposito D, Frank PH, Zhou M, Yu LR, Joswik C, Zhang X, McGowan B, Jacobowitz DM, Pollard HB, Hao T, Hill DE, Vidal M, Conrads TP, Veenstra TD, Hartley JL.
Pooled ORF Expression Technology (POET): Using proteomics to screen pools of open reading frames for protein expression.

Mol Cell Proteomics 2005; 11:1647-52.

 

Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S,Rosenberg J, Goldberg DS, ZhangLV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas e,Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M.
Towards a proteome-scale map of the human protein-protein interaction network.
Nature
2005; 437:1173-8.

 

Cusick ME, Klitgord N, Vidal M, Hill DE.
Interactome: Gateway into systems biology.
Hum Mol Genet 2005; 14:R171-81.

 

Scholtens D, Vidal M, Gentleman R.
Local modeling of global interactome networks.
Bioinformatics 2005; 17:3548-57.

 

Gunsalus KC, Ge H, Schetter AJ, Goldberg DS, Han JD, Hao T, Bertin N, Li N, Huang J, Chuang LS, Mani R, Berriz G, Hyman AA, Sonnichsen B, Echeverri CJ, Roth FP, Vidal M, Piano F.
Predictive models of molecular machines involved in Caenorhabditis elegans early embryogenesis.
Nature 2005; 7052:861-5.

 

Sieburth DS, Ch’ng Q, Dybbs M, Tavazoie M, Kennedy S, Wang D, Dupuy D, Rual JF, Hill DE, Vidal M, Ruvkun G, Kaplan JM.
Systematic analysis of genes required for synapse structure and function.

Nature 2005; 436:510-7.

 

Han JD, Dupuy D, Bertin N, Cusick ME, Vidal M.
Effect of sampling on topology predictions of protein-protein interaction networks.
Nat Biotechnol 2005; 23:839-44.

 

Caruso ME, Jenna S, Beaulne S, Lee EH, Bergeron A, Chauve C, Roby P, Rual JF, Hill DE, Vidal M, Bosse R, Chevet E.
Biochemical clustering of monomeric GTPases of the Ras superfamily.
Mol Cell Proteomics 2005; 4:936-44.

 

Milstein S, Vidal M.
Perturbing interactions.
Nat Methods
2005; 2:412-4.

 

Kim JK, Gabel HW, Kamath RS, Tewari M, Pasquinelli A, Rual JF, Kennedy S,
Dybbs M, Bertin N, Kaplan JM, Vidal M, Ruvkun G.

Functional genomic analysis of RNA interference in C. elegans.
Science 2005; 308:1164-7.

 

Jenna S, Caruso ME, Emadali A, Nguyen DT, Dominguez M, Li S, Roy R, Reboul J,
Vidal M, Tzimas GN, Bosse R, Chevet   E.

Regulation of membrane trafficking by a novel Cdc42-related protein in Caenorhabditiselegans epithelial cells.
Mol Biol Cell
2005; 16:1629-39.

 

Wei C, Lamesch P, Arumugam M, Rosenberg J, Hu P, Vidal M, Brent MR.
Closing in on the C. elegans ORFeome by cloning TWINSCAN predictions.
Genome Res 2005; 15:577-82.

 

Vidal M.
Interactome modeling.
FEBS Lett 2005; 579:1834-8.

 

Fox RM, Von Stetina SE, Barlow SJ, Shaffer C, Olszewski KL, Moore JH,
Dupuy D, Vidal M, Miller DM.

A gene expression fingerprint of C. elegans embryonic motor neurons.

BMC Genomics 2005; 6:42.

 

Fernandez AG, Gunsalus KC, Huang J, Chuang LS, Ying N, Liang HI, Tang C, Schetter AJ, Zegar C, Rual J-F, Hill DE, Reinke V, Vidal M, and Piano, F
New genes with roles in the C. elegans embryo revealed using RNAi of ovary-enriched ORFeome clones.
Genome Res
2005; 15:250–9.

2003 - © CCSB - Center for Cancer Systems Biology DFCI - Dana-Faber Cancer Institute Print version  Accessible Version